cloud

BridgeDb

A framework to map identifiers between various biological databases and related sources.

Documentation

VHP4Safety Documentation

• Service introduction: BridgeDb: Mapping Gene Identifiers
• Workflow: Information about chemicals
• Demo:

VHP4Safety Service Metadata

• Development cloud: https://bridgedb.cloud.vhp4safety.nl/
• Login required: no
• Implementation status:
• TRL:
• Type: -
• Contact: Egon Willighagen
• API Type: REST
• Categories: -
• Targeted users: -
• Relevant VHP4Safety Use case: -

Technical tool specifications

• Provided by: Dept. of Bioinformatics - BiGCaT, NUTRIM, Maastricht University
• Citation: https://doi.org/10.1186/1471-2105-11-5
• Version: 2.3.3
• License: Apache-2.0
• Source Code: https://github.com/bridgedb/BridgeDb
• Docker: https://hub.docker.com/r/bigcatum/bridgedb
• Bio.tools: https://bio.tools/bridgedb
• FAIRsharing: https://fairsharing.org/10.25504/FAIRsharing.5ry74y
• TeSS: https://tess.elixir-europe.org/search?q=bridgedb
• RSD: bridgedb-java
• Wikipedia: