cloud

Molecular AOP Builder

A web application for mapping Key Events from Adverse Outcome Pathways to WikiPathways and Gene Ontology Biological Process terms, using intelligent suggestions based on gene overlap, text similarity, and BioBERT semantic embeddings.

Main Webpage: https://github.com/marvinm2/KE-WP-mapping

Tool Webpage: https://molaop-builder.vhp4safety.nl/

Contact

Contact Person(s): Marvin Martens (marvin.martens@maastrichtuniversity.nl)

Provider Institute: Department of Translational Genomics (TGX), Maastricht University

Documentation

VHP4Safety Documentation

• Service Introduction:

• Workflow:

• Demo:

VHP4Safety Service Metadata

• Stage:

• Sub-Stage:

• Development Cloud: https://molaop-builder.vhp4safety.nl/

• Login Required: true

• TRL:

• Type: internal

• API Type: REST

• Categories: To be added

• Targeted Users: To be added

• Relevant VHP4Safety Use Case: To be added

Technical Tool Specifications

• Citation:

• Version: 2.3.0

• License: GPL-2.0

• Source Code: https://github.com/marvinm2/KE-WP-mapping

• Docker: https://github.com/marvinm2/KE-WP-mapping

• Bio.tools:

• FAIRsharing:

• TeSS:

• RSD:

• Wikipedia: