cloud

R-ODAF Shiny

An R Shiny interface for the R-ODAF framework that provides standardised RNA-seq differential expression analysis for regulatory toxicology applications.

Tool Webpage: https://r-odaf.nl/

Contact

Contact Person(s): VHP4Safety Support (vhp4safety@uu.nl), Saad Lodhi (saad.lodhi@maastrichtuniversity.nl), Danyel Jennen (danyel.jennen@maastrichtuniversity.nl)

Provider Institute: Maastricht University

Documentation

VHP4Safety Documentation

• Service Introduction:

• Workflow:

• Demo:

VHP4Safety Service Metadata

• Stage: Toxicodynamics/AOP

• Sub-Stage: Transcriptomics / Differential Expression

• Development Cloud: https://r-odaf.nl/

• Login Required:

• TRL:

• Type: internal

• API Type:

• Categories: To be added

• Targeted Users: To be added

• Relevant VHP4Safety Use Case: To be added

Technical Tool Specifications

• Citation: Not available

• Version:

• License: MIT

• Source Code: https://github.com/fcaiment/R-ODAF/tree/shiny-version

• Docker:

• Bio.tools:

• FAIRsharing:

• TeSS: R-ODAF

• RSD:

• Wikipedia: